Brownie Stuffed Cookie Dough Cupcakes Recipe

If you’re ready to wow your taste buds and impress anyone lucky enough to snag a bite, Brownie Stuffed Cookie Dough Cupcakes deserve a spot at the top of your must-bake list. This irresistible treat brings together a fudgy brownie bottom, a dreamy layer of edible cookie dough, and a decadent chocolate ganache—all in one adorable cupcake! Whether you’re baking for a special occasion or just craving a comforting mashup dessert, these cupcakes promise pure joy in every bite, combining favorite flavors and nostalgic textures into one ultimate mouthwatering creation.

Brownie Stuffed Cookie Dough Cupcakes Recipe - Recipe Image

Ingredients You’ll Need

The beauty of these cupcakes is that every ingredient works hard: rich chocolate, buttery dough, and just the right hint of sweetness. Gather these everyday staples and see how each one transforms Brownie Stuffed Cookie Dough Cupcakes into a delicious, multi-layered masterpiece.

  • Brownie mix (plus box ingredients): The shortcut to a perfectly chewy, fudgy base—choose your favorite brand or flavor for a personalized touch.
  • Unsalted butter: This softened star adds richness to the cookie dough and helps everything come together smoothly.
  • Brown sugar: For that deeper, caramel flavor in the cookie dough and an ultra-moist texture.
  • Granulated sugar: Adds just the right amount of extra sweetness and helps create that classic cookie crumb.
  • Large eggs: These bring moisture and structure so both brownie and cookie layers bake to perfection.
  • Vanilla extract: Enhances the sweet, inviting aroma and rounds out all the flavors.
  • All-purpose flour: Provides the essential backbone to the cookie dough, keeping it soft but sturdy.
  • Baking soda: Gives a little lift to the cookie dough top and keeps things from getting too dense.
  • Salt: A pinch sharpens and balances all the sweet, chocolatey notes.
  • Mini chocolate chips: Speckle the cookie dough with melty pops of chocolate in every bite.
  • Sweetened condensed milk: This sneaky ingredient keeps the cookie dough extra luscious and safe to eat unbaked.
  • Heavy cream: Combines with chocolate chips for a ganache that drapes over the finished cupcakes—a rich finishing touch.
  • Chocolate chips (for topping, optional): Melted down, these turn into a dreamy ganache if you’re craving something extra decadent.

How to Make Brownie Stuffed Cookie Dough Cupcakes

Step 1: Prepare and Partially Bake the Brownie Base

Start by whipping up your favorite brownie mix just as the box instructs, combining it with the eggs, oil, and water called for. Preheat your oven to 350°F and line your cupcake pan with paper liners. Drop about a tablespoon of brownie batter into each liner—just enough to completely cover the bottom. Bake these brownie bases for 10 minutes; they’ll set just enough to anchor your decadent cookie dough topping.

Step 2: Make the Cookie Dough Layer

While the brownie bottoms bake, cream together the softened butter, brown sugar, and granulated sugar until the mixture is light and fluffy (you can use a hand mixer or stand mixer for ease). Beat in your eggs and vanilla until everything’s smooth and well-blended. In a separate bowl, whisk your flour, baking soda, and salt together, then slowly add the dry ingredients to the wet mixture. Stir in the mini chocolate chips and the sweetened condensed milk, which will transform the dough into a scoopable, utterly safe-to-eat layer that’s perfect for stuffing on top of those brownies.

Step 3: Assemble the Cupcakes

Once your brownie bases have cooled for a few minutes (they should still be slightly warm), use a cookie scoop or spoon to add a generous mound—about two tablespoons—of cookie dough on top of each brownie. Gently press the dough down so it fully covers the brownie layer. This part is so satisfying—the transformation from humble batter to beautiful, layered cupcake happens right here!

Step 4: Bake Until Golden

Return your pan to the oven and bake for another 12 to 14 minutes. You’re looking for a lightly golden cookie top, while the base remains soft and decadent. Resist overbaking; the magic happens when the center stays just slightly gooey, delivering that unbeatable Brownie Stuffed Cookie Dough Cupcakes texture and flavor.

Step 5: Cool and Top With Ganache

Let the cupcakes cool completely in the pan before the final flourish. For an optional but truly decadent finish, melt chocolate chips with heavy cream (a quick zap in the microwave works like a charm), then spoon or drizzle the ganache over each cupcake. The silky, glossy chocolate takes these cupcakes over the top—just like you deserve!

How to Serve Brownie Stuffed Cookie Dough Cupcakes

Brownie Stuffed Cookie Dough Cupcakes Recipe - Recipe Image

Garnishes

Your Brownie Stuffed Cookie Dough Cupcakes are already a feast for the eyes, but a sprinkle of mini chocolate chips, a dusting of cocoa powder, or a swirl of whipped cream amps up the wow factor. If you’re making ganache, consider adding a pinch of coarse sea salt over the top to set off all the rich flavors.

Side Dishes

Pair these rich, chocolatey cupcakes with something refreshing—think a tall glass of cold milk, creamy vanilla ice cream, or a vibrant fruit salad. Lighter, tangy sides offset the sweetness and reset your palate between bites.

Creative Ways to Present

Present your cupcakes on a tiered dessert stand for eye-catching height at parties, or nestle them into decorative cupcake wrappers for bake sales or gifts. For a playful twist, serve with tiny milk bottles or on a platter garnished with fresh strawberries, making your batch of Brownie Stuffed Cookie Dough Cupcakes the star of any dessert table.

Make Ahead and Storage

Storing Leftovers

Let your cupcakes cool fully, then store them in an airtight container at room temperature for up to three days. Keeping them tightly covered prevents them from drying out and preserves that soft, gooey center you worked so hard to create.

Freezing

If you (somehow) have leftovers or want to make Brownie Stuffed Cookie Dough Cupcakes ahead, good news! Wrap each cooled cupcake individually in plastic wrap, then pop them into a freezer bag or airtight container. They’ll stay fresh and delicious for up to two months. Thaw at room temperature or in the fridge overnight before serving.

Reheating

To bring back that just-baked warmth, microwave an unwrapped cupcake for about 10 to 15 seconds. If you want the ganache to stay glossy, add it after reheating. You’ll enjoy that luxurious, gooey center as if they were fresh from the oven!

FAQs

Can I use homemade brownie batter instead of a box mix?

Absolutely! Swap in your favorite homemade brownie batter recipe if you want to put an extra personal spin on your Brownie Stuffed Cookie Dough Cupcakes. Just make sure you use enough batter to cover the base of each liner and adjust baking times if needed.

Is the cookie dough safe to eat since it bakes only briefly?

Yes! This recipe uses sweetened condensed milk in the cookie dough layer rather than raw flour and keeps things egg-free for that portion, making it perfectly edible even with the short baking time. Bake just long enough for the tops to set and lightly brown.

What if I don’t have mini chocolate chips?

No problem—just chop up regular chocolate chips or your favorite chocolate bar into small pieces. The smaller size melts nicely and distributes those chocolatey pockets throughout the cookie dough.

Can I make these cupcakes gluten-free?

Definitely! Substitute a good-quality 1:1 gluten-free flour blend for all-purpose flour and select a gluten-free brownie mix. Double-check all your mix-ins and toppings to ensure they’re certified gluten-free, too.

What’s the best way to transport these cupcakes?

Because they’re so sturdy, Brownie Stuffed Cookie Dough Cupcakes travel well. Place them in a cupcake carrier or a tightly-sealed container. If you’re adding ganache right before serving, keep it separate and drizzle on site for the prettiest presentation.

Final Thoughts

Bake a batch of these Brownie Stuffed Cookie Dough Cupcakes and you’ll discover the magic of combining two beloved desserts into one jaw-dropping treat. Whether you share them at a party, gift box them for a friend, or keep a secret stash just for yourself, you’ll love every decadent bite. Happy baking!

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